YANG Hong1, 2, 3, SHAO Chenyu1, YAO Lin1, 2, 3, RAO Jiayi1, 2, 3, PENG Lüwen1, 2, 3, HUANG Feiyi2, 3, DUAN Jihua2, 3, XIE Nianci2, 3, CHEN Yuhong2, 3, LI Saijun2, 3, LIU Shuoqian1, 2, LEI Yu1, 2
Journal of Tea Science.
Online available: 2026-05-07
As the primary reproductive organ of the tea plant (Camellia sinensis), the flower exhibits
rich phenotypic diversity, which holds significant importance for the genetic
improvement of tea varieties. In this study, 64 tea germplasm accessions were
used to systematically investigate the phenotypic diversity of nine qualitative
traits and twelve quantitative traits related to floral morphology. Based on 47 111
high-quality SNP markers, population genetic structure analysis and genome-wide
association study (GWAS) were performed. The results revealed abundant genetic
diversity in floral traits among the tested materials, with ovary villi, weight
per 100 flowers, and the proportion of the bifurcation to the columella showing
relatively large variation, which could serve as core evaluation indicators.
Population structure analysis divided the materials into three genetic
subgroups, which were highly consistent with the phenotypic clustering results.
Through GWAS, 273 SNP loci significantly associated with 10 important floral
traits were identified. Furthermore, five core candidate genes (GWHTASIV003067,
GWHTASIV018433,
GWHTASIV032688, GWHTASIV001183, GWHTASIV044042) were screened, which are involved
in key biological processes such as growth regulation, RNA editing, cell cycle
control, chromatin remodeling, and transcriptional regulation. This study
provides, for the first time, a systematic multidimensional analysis of the
genetic basis of floral traits in tea plants, offering important gene resources
and a theoretical foundation for research into the molecular mechanisms of
floral traits and for molecular marker-assisted breeding in tea plant.