The optimal ISSR-PCR reaction conditions in tea was established by studying the main parameters. Results showed that the optimum concentration of five important components i.e. template DNA, primer, Mg++, dNTP, Taq DNA polymerase in 20βµl reaction mixture was 10ng, 150βnmol/L, 1.5βmmol/L, 150βµmol/L, 0.5βU, respectively. The appropriate annealing temperature was average 4.5℃ higher than Tm of corresponding primer, and at least 30 PCR cycles should be carried out to ensure sufficient PCR products. ISSR polymorphism between thirteen tea germplasm was 77.6%, and 12 out of 13 tea germplasm could be identified by ISSR fingerprinter established with primer TRI18.
YAO Ming-zhe
,
WANG Xin-chao
,
CHEN Liang
,
YANG Ya-jun
. Establishment of ISSR-PCR Reaction Conditions in Tea Plant[J]. Journal of Tea Science, 2004
, 24(3)
: 172
-176
.
DOI: 10.13305/j.cnki.jts.2004.03.005
[1] Zietkiewica E, Rafalski A, Labuda D.Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification[J]. Genomics, 1994, 20: 176-183.
[2] Reddy M P, Sarla N, Siddiq E A.Inter simple sequence repeat (ISSR) polymorphixm and its application in plant breeding[J]. Euphytica, 2002, 128:9-17.
[3] 陈亮,杨亚军,虞富莲,等. 15个茶树品种遗传多样性的RAPD分析[J]. 茶叶科学,1998,18(1):21-27.
[4] Fang D Q, Krueger R R, Roose M L.Phylogenetica relationships among selected Citrus gerplam accessions revealed by inter simple sequence repeat (ISSR) markers[J]. J Amer Soc Horticul Sci, 1998, 123:612-617.
[5] Blair M W, Panaud O, McCouch S R. Inter-simple sequence repeat (ISSR) amplification for analysis of microsatellite motif frequency and fingerprinting in rice(Oryza sativa L)[J]. Theor Appl Genet, 1999, 98:780-792.
[6] Ammiraju J S, Dholakia B B,Santra D K, et al. Identification of inter simple sequence repeat(ISSR) markers associated with size in wheat[J]. Theor Appl Genet, 2001, 102:726-732.
[7] Moreno S, Martin J P, Ortiz M.Inter-simple sequence repeat PCR for characterization of closely related grapevine germplasm[J]. Euphytica, 1998, 101:117-125.